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About

  • About Dockstore

Getting Started Guide

  • Introduction
  • Getting Started with Docker
  • Getting Started with CWL
  • Getting Started with WDL
  • Getting Started with Nextflow
  • Getting Started with Galaxy
  • Creating a Dockstore Account
  • Tools
  • Workflows
  • Hosted Tools and Workflows
  • Services
  • Dockstore GitHub App

Videos (Tutorials & Presentations)

  • Videos

Launch

  • Launching Tools and Workflows
  • AnVIL
  • BioData Catalyst
  • Cavatica
  • Cancer Genomics Cloud
  • DNAnexus
  • DNAstack
  • Galaxy
  • Nextflow Tower
  • Terra

End User Topics

  • Introduction
  • Faceted Search
  • Starring Tools and Workflows
  • Language Support
  • ORCIDs in Dockstore

Advanced Developer Topics

  • Introduction
  • Docker Registries
  • Different Ways To Register Tools on Dockstore
  • Public and Private Dockstore Tools
  • Checker Workflows
  • TRS With Checker Workflows
  • Sharing Workflows
  • Aliases
  • Set Up File Provisioning Plugins
  • Developing File Provisioning Plugins
  • Advanced CLI Features
  • Docker Alternatives
  • Creating Snapshots and Requesting DOIs
  • Checksums
  • Write-API Conversion Process
  • Batch Services
  • AWS Batch
  • Azure Batch
  • Posting Zip Files
  • Verification
  • Organizations and Collections
  • CWL Best Practices
  • WDL Best Practices
  • Nextflow Best Practices
  • Dockstore Best Practices
  • Best Practices for Secure and FAIR Workflows

Extras

  • User Created
  • Posters and Talks
  • Templates

BCC 2020

  • Docker Training
  • WDL Training

FAQ

  • FAQ

Roadmap

  • Roadmap

Changelog

  • Changelog

News and Events

  • Dockstore 1.11.5
  • Dockstore 1.10.0
  • Dockstore 1.9.0
  • Dockstore 1.8.0
  • Dockstore 1.7.0
  • Dockstore 1.6.0
  • Dockstore 1.5.0
  • Dockstore 1.4.0
  • Dockstore 1.3.0
  • Dockstore 1.2.10
  • DNAstack Integration
  • Dockstore 1.2.5
  • Upcoming Features
  • Dockstore Paper
  • Dockstore 1.1 Release
  • Dockstore 1.0
  • Genome Canada Grant
  • ISMB Tutorial
  • First Workflow from the PCAWG Project released
  • News and Events

System Status

  • System Status
Dockstore
  • Docs »
  • Dockstore Paper
  • Edit on GitHub

Dockstore PaperΒΆ

A Dockstore paper has been published and indexed as The Dockstore: enabling modular, community-focused sharing of Docker-based genomics tools and workflows.!

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